High Voltage (Remix), H! VLTG3, Standing in the Middle, Wish (live LPU 4.0), Step Up (live version on the Somewhere I Belong single), the entirety of Live in Texas/LPU 3.0, With You (live LPU 2.0 - Chester says "let me fucking hear you, London" or something to that effect during the intro and it's censored), Reading My Eyes (live LPU 6), You Ain't Gotsta Gotsta, Bleed It Out (live LPU 7), and oddly, the live version of Big Pimpin'/Papercut on the Collision Course DVD has the line "no passion" censored for some reason.
I may be missing a few.