My Predictions:
One Step Closer, Crawling, In The End, Faint, Breaking The Habit, Numb, What I've Done, Given Up, Bleed It Out, The Catalyst, Waiting For The End, and Iridescent will all staying.
Papercut and Lying From You will probably rotate in and out of setlists like they have done over the last few years. Tracks like Leave Out All The Rest will probably do the same.
No More Sorrow, When They Come For Me, Shadow Of The Day will all probably be removed in favor of the aggressive and slower tunes from the new album. However, they may rotate in out as well.
Burning In The Skies, Blackout, Wretches And Kings, and The Messenger will most likely get dropped permanently.
New Divide may stick around, but I wouldn't be surprised if it's dropped as well.